Update CodeQL CLI manual (#39456)

Co-authored-by: Felicity Chapman <felicitymay@github.com>

content/code-security/codeql-cli/codeql-cli-manual/database-index-files.md

@@ -1,6 +1,6 @@
 ---
 title: database index-files
-versions:
+versions: # DO NOT MANUALLY EDIT. CHANGES WILL BE OVERWRITTEN BY A 🤖
   fpt: '*'
   ghae: '*'
   ghec: '*'
@@ -41,11 +41,11 @@ The `--include`, `--exclude`, and `--prune` options all take glob
 patterns, which can use the following wildcard characters:
 
 - A single "?" matches any character other than a forward/backward
-    slash;
+  slash;
 - A single "\*" matches any number of characters other than a
-    forward/backward slash;
+  forward/backward slash;
 - The pattern "\*\*" matches zero or more complete directory
-    components.
+  components.
 
 ## Primary options