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docs/content/code-security/code-scanning/troubleshooting-code-scanning/results-different-than-expected.md

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Results are different than expected Results different than expected If your {% data variables.product.prodname_code_scanning %} results are different than you expected, you can check which configurations are active. true
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/code-security/code-scanning/troubleshooting-code-scanning/results-are-different-than-expected

If your {% data variables.product.prodname_code_scanning %} results are different than you expected, you may have both default and advanced setup configured for your repository. When you enable default setup, this disables the existing {% data variables.product.prodname_codeql %} workflow file and blocks any {% data variables.product.prodname_codeql %} API analysis from uploading results.

To check if default setup is enabled, navigate to the main page of the repository, then click {% octicon "gear" aria-hidden="true" %} Settings. In the "Security" section of the sidebar, click {% octicon "codescan" aria-hidden="true" %} {% ifversion code-security-wording-only %}Code security{% else %}Code security and analysis{% endif %}. In the "{% data variables.product.prodname_code_scanning_caps %}" section of the page, next to "{% data variables.product.prodname_codeql %} analysis", click {% octicon "kebab-horizontal" aria-label="Menu" %}. If there is a {% octicon "workflow" aria-hidden="true" %} Switch to advanced option, you are currently using default setup.

If you want to return to using advanced setup and get {% data variables.product.prodname_code_scanning %} results from your custom workflow file, click {% octicon "stop" aria-hidden="true" %} Disable {% data variables.product.prodname_codeql %} to disable default setup. Then you should re-enable your pre-existing workflows to start triggering and uploading results from advanced setup. For more information, see AUTOTITLE and AUTOTITLE.

{% data reusables.code-scanning.troubleshooting-multiple-configurations %}