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When executed in exhaustive mode, multiple instances of test_migrated_table_field_id_resolution is running in parallel, reading and writing the same files which can lead to various errors, hence the multiple Jira tickets in the title. Building upon rewrite-iceberg-metadata.py, with this patch the different test instances load the tables under different directories (corresponding to the unique_database). Change-Id: Id41a78940a5da5344735974e1d2c94ed4f24539a Reviewed-on: http://gerrit.cloudera.org:8080/21882 Reviewed-by: Impala Public Jenkins <impala-public-jenkins@cloudera.com> Tested-by: Impala Public Jenkins <impala-public-jenkins@cloudera.com>
199 lines
8.2 KiB
Python
199 lines
8.2 KiB
Python
# Licensed to the Apache Software Foundation (ASF) under one
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# or more contributor license agreements. See the NOTICE file
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# distributed with this work for additional information
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# regarding copyright ownership. The ASF licenses this file
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# to you under the Apache License, Version 2.0 (the
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# "License"); you may not use this file except in compliance
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# with the License. You may obtain a copy of the License at
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#
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# http://www.apache.org/licenses/LICENSE-2.0
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#
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# Unless required by applicable law or agreed to in writing,
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# software distributed under the License is distributed on an
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# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
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# KIND, either express or implied. See the License for the
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# specific language governing permissions and limitations
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# under the License.
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# This module contains utility functions for testing Parquet files,
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# and other functions used for checking for strings in files and
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# directories.
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from __future__ import absolute_import, division, print_function
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import os
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import re
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import shutil
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import tempfile
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from subprocess import check_call
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from tests.util.filesystem_utils import get_fs_path, WAREHOUSE_PREFIX
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from tests.util.iceberg_metadata_util import rewrite_metadata
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def create_iceberg_table_from_directory(impala_client, unique_database, table_name,
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file_format):
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"""Utility function to create an iceberg table from a directory. The directory must
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exist in $IMPALA_HOME/testdata/data/iceberg_test with the name 'table_name'"""
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# Only orc and parquet tested/supported
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assert file_format == "orc" or file_format == "parquet"
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local_dir = os.path.join(
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os.environ['IMPALA_HOME'], 'testdata', 'data', 'iceberg_test', table_name)
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assert os.path.isdir(local_dir)
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# Rewrite iceberg metadata to use the warehouse prefix and use unique_database
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tmp_dir = tempfile.mktemp(table_name)
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# Need to create the temp dir so 'cp -r' will copy local dir with its original name
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# under the temp dir. rewrite_metadata() has the assumption that the parent directory
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# of the 'metadata' directory bears the name of the table.
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check_call(['mkdir', '-p', tmp_dir])
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check_call(['cp', '-r', local_dir, tmp_dir])
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local_dir = os.path.join(tmp_dir, table_name)
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rewrite_metadata(WAREHOUSE_PREFIX, unique_database, os.path.join(local_dir, 'metadata'))
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# Put the directory in the database's directory (not the table directory)
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hdfs_parent_dir = os.path.join(get_fs_path("/test-warehouse"), unique_database)
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hdfs_dir = os.path.join(hdfs_parent_dir, table_name)
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# Purge existing files if any
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check_call(['hdfs', 'dfs', '-rm', '-f', '-r', hdfs_dir])
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# Note: -d skips a staging copy
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check_call(['hdfs', 'dfs', '-mkdir', '-p', hdfs_parent_dir])
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check_call(['hdfs', 'dfs', '-put', '-d', local_dir, hdfs_parent_dir])
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# Create external table
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qualified_table_name = '{0}.{1}'.format(unique_database, table_name)
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impala_client.execute("""create external table {0} stored as iceberg location '{1}'
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tblproperties('write.format.default'='{2}', 'iceberg.catalog'=
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'hadoop.tables')""".format(qualified_table_name, hdfs_dir,
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file_format))
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# Automatic clean up after drop table
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impala_client.execute("""alter table {0} set tblproperties ('external.table.purge'=
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'True');""".format(qualified_table_name))
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def create_table_from_parquet(impala_client, unique_database, table_name):
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"""Utility function to create a database table from a Parquet file. A Parquet file must
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exist in $IMPALA_HOME/testdata/data with the name 'table_name'.parquet"""
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create_table_from_file(impala_client, unique_database, table_name, 'parquet')
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def create_table_from_orc(impala_client, unique_database, table_name):
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"""Utility function to create a database table from a Orc file. A Orc file must
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exist in $IMPALA_HOME/testdata/data with the name 'table_name'.orc"""
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create_table_from_file(impala_client, unique_database, table_name, 'orc')
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def create_table_from_file(impala_client, unique_database, table_name, file_format):
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filename = '{0}.{1}'.format(table_name, file_format)
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local_file = os.path.join(os.environ['IMPALA_HOME'],
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'testdata/data/{0}'.format(filename))
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assert os.path.isfile(local_file)
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# Put the file in the database's directory (not the table directory) so it is
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# available for a LOAD DATA statement.
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hdfs_file = get_fs_path(
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os.path.join("/test-warehouse", "{0}.db".format(unique_database), filename))
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# Note: -d skips a staging copy
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check_call(['hdfs', 'dfs', '-put', '-f', '-d', local_file, hdfs_file])
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# Create the table and load the file
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qualified_table_name = '{0}.{1}'.format(unique_database, table_name)
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impala_client.execute('create table {0} like {1} "{2}" stored as {1}'.format(
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qualified_table_name, file_format, hdfs_file))
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impala_client.execute('load data inpath "{0}" into table {1}'.format(
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hdfs_file, qualified_table_name))
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def create_table_and_copy_files(impala_client, create_stmt, unique_database, table_name,
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files):
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# Create the table
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create_stmt = create_stmt.format(db=unique_database, tbl=table_name)
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impala_client.execute(create_stmt)
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hdfs_dir = get_fs_path(
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os.path.join("/test-warehouse", unique_database + ".db", table_name))
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copy_files_to_hdfs_dir(files, hdfs_dir)
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# Refresh the table metadata to see the new files
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refresh_stmt = "refresh {0}.{1}".format(unique_database, table_name)
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impala_client.execute(refresh_stmt)
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def copy_files_to_hdfs_dir(files, hdfs_dir):
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# Copy the files
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# - build a list of source files
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# - issue a single put to the hdfs_dir ( -d skips a staging copy)
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source_files = []
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for local_file in files:
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# Cut off leading '/' to make os.path.join() happy
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local_file = local_file if local_file[0] != '/' else local_file[1:]
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local_file = os.path.join(os.environ['IMPALA_HOME'], local_file)
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assert os.path.isfile(local_file)
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source_files.append(local_file)
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check_call(['hdfs', 'dfs', '-put', '-f', '-d'] + source_files + [hdfs_dir])
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def grep_dir(dir, search, filename_search=""):
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'''Recursively search for files that contain 'search' and have a filename that matches
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'filename_search' and return a list of matched lines grouped by file.
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'''
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filename_matcher = re.compile(filename_search)
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matching_files = dict()
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for dir_name, _, file_names in os.walk(dir):
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for file_name in file_names:
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file_path = os.path.join(dir_name, file_name)
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if os.path.islink(file_path) or not filename_matcher.search(file_path):
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continue
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with open(file_path) as file:
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matching_lines = grep_file(file, search)
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if matching_lines:
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matching_files[file_name] = matching_lines
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return matching_files
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def grep_file(file, search):
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'''Return lines in 'file' that match the 'search' regex. 'file' must already be
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opened.
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'''
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matcher = re.compile(search)
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matching_lines = list()
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for line in file:
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if matcher.search(line):
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matching_lines.append(line)
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return matching_lines
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def assert_file_in_dir_contains(dir, search):
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'''Asserts that at least one file in the 'dir' contains the 'search' term.'''
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results = grep_dir(dir, search)
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assert results, "%s should have a file containing '%s' but no file was found" \
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% (dir, search)
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def assert_no_files_in_dir_contain(dir, search):
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'''Asserts that no files in the 'dir' contains the 'search' term.'''
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results = grep_dir(dir, search)
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assert not results, \
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"%s should not have any file containing '%s' but a file was found" \
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% (dir, search)
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def make_tmp_test_dir(name):
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"""Create temporary directory with prefix 'impala_test_<name>_'.
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Return the path of temporary directory as string. Caller is responsible to
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clean them. If LOG_DIR env var exist, the temporary dir will be placed inside
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LOG_DIR."""
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# TODO: Consider using tempfile.TemporaryDirectory from python3 in the future.
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parent_dir = os.getenv("LOG_DIR", None)
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return tempfile.mkdtemp(prefix='impala_test_{}_'.format(name), dir=parent_dir)
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def cleanup_tmp_test_dir(dir_path):
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"""Remove temporary 'dir_path' and its content.
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Ignore errors upon deletion."""
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shutil.rmtree(dir_path, ignore_errors=True)
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