Keras Sample

Dockerfiles/1.0.10/Dockerfile

@@ -0,0 +1,29 @@
+FROM continuumio/miniconda:4.5.11
+
+# install git
+RUN apt-get update && apt-get upgrade -y && apt-get install -y git
+
+# create a new conda environment named azureml
+RUN conda create -n azureml -y -q Python=3.6
+
+# install additional packages used by sample notebooks. this is optional
+RUN ["/bin/bash", "-c", "source activate azureml && conda install -y tqdm cython matplotlib scikit-learn"]
+
+# install azurmel-sdk components
+RUN ["/bin/bash", "-c", "source activate azureml && pip install azureml-sdk[notebooks]==1.0.10"]
+
+# clone Azure ML GitHub sample notebooks
+RUN cd /home && git clone -b "azureml-sdk-1.0.10" --single-branch https://github.com/Azure/MachineLearningNotebooks.git
+
+# generate jupyter configuration file
+RUN ["/bin/bash", "-c", "source activate azureml && mkdir ~/.jupyter && cd ~/.jupyter && jupyter notebook --generate-config"]
+
+# set an emtpy token for Jupyter to remove authentication. 
+# this is NOT recommended for production environment
+RUN echo "c.NotebookApp.token = ''" >> ~/.jupyter/jupyter_notebook_config.py
+
+# open up port 8887 on the container
+EXPOSE 8887
+
+# start Jupyter notebook server on port 8887 when the container starts
+CMD /bin/bash -c "cd /home/MachineLearningNotebooks && source activate azureml && jupyter notebook --port 8887 --no-browser --ip 0.0.0.0 --allow-root"

Dockerfiles/1.0.2/Dockerfile

@@ -0,0 +1,29 @@
+FROM continuumio/miniconda:4.5.11
+
+# install git
+RUN apt-get update && apt-get upgrade -y && apt-get install -y git
+
+# create a new conda environment named azureml
+RUN conda create -n azureml -y -q Python=3.6
+
+# install additional packages used by sample notebooks. this is optional
+RUN ["/bin/bash", "-c", "source activate azureml && conda install -y tqdm cython matplotlib scikit-learn"]
+
+# install azurmel-sdk components
+RUN ["/bin/bash", "-c", "source activate azureml && pip install azureml-sdk[notebooks]==1.0.2"]
+
+# clone Azure ML GitHub sample notebooks
+RUN cd /home && git clone -b "azureml-sdk-1.0.2" --single-branch https://github.com/Azure/MachineLearningNotebooks.git
+
+# generate jupyter configuration file
+RUN ["/bin/bash", "-c", "source activate azureml && mkdir ~/.jupyter && cd ~/.jupyter && jupyter notebook --generate-config"]
+
+# set an emtpy token for Jupyter to remove authentication. 
+# this is NOT recommended for production environment
+RUN echo "c.NotebookApp.token = ''" >> ~/.jupyter/jupyter_notebook_config.py
+
+# open up port 8887 on the container
+EXPOSE 8887
+
+# start Jupyter notebook server on port 8887 when the container starts
+CMD /bin/bash -c "cd /home/MachineLearningNotebooks && source activate azureml && jupyter notebook --port 8887 --no-browser --ip 0.0.0.0 --allow-root"

Dockerfiles/1.0.6/Dockerfile

@@ -0,0 +1,29 @@
+FROM continuumio/miniconda:4.5.11
+
+# install git
+RUN apt-get update && apt-get upgrade -y && apt-get install -y git
+
+# create a new conda environment named azureml
+RUN conda create -n azureml -y -q Python=3.6
+
+# install additional packages used by sample notebooks. this is optional
+RUN ["/bin/bash", "-c", "source activate azureml && conda install -y tqdm cython matplotlib scikit-learn"]
+
+# install azurmel-sdk components
+RUN ["/bin/bash", "-c", "source activate azureml && pip install azureml-sdk[notebooks]==1.0.6"]
+
+# clone Azure ML GitHub sample notebooks
+RUN cd /home && git clone -b "azureml-sdk-1.0.6" --single-branch https://github.com/Azure/MachineLearningNotebooks.git
+
+# generate jupyter configuration file
+RUN ["/bin/bash", "-c", "source activate azureml && mkdir ~/.jupyter && cd ~/.jupyter && jupyter notebook --generate-config"]
+
+# set an emtpy token for Jupyter to remove authentication. 
+# this is NOT recommended for production environment
+RUN echo "c.NotebookApp.token = ''" >> ~/.jupyter/jupyter_notebook_config.py
+
+# open up port 8887 on the container
+EXPOSE 8887
+
+# start Jupyter notebook server on port 8887 when the container starts
+CMD /bin/bash -c "cd /home/MachineLearningNotebooks && source activate azureml && jupyter notebook --port 8887 --no-browser --ip 0.0.0.0 --allow-root"

Dockerfiles/1.0.8/Dockerfile

@@ -0,0 +1,29 @@
+FROM continuumio/miniconda:4.5.11
+
+# install git
+RUN apt-get update && apt-get upgrade -y && apt-get install -y git
+
+# create a new conda environment named azureml
+RUN conda create -n azureml -y -q Python=3.6
+
+# install additional packages used by sample notebooks. this is optional
+RUN ["/bin/bash", "-c", "source activate azureml && conda install -y tqdm cython matplotlib scikit-learn"]
+
+# install azurmel-sdk components
+RUN ["/bin/bash", "-c", "source activate azureml && pip install azureml-sdk[notebooks]==1.0.8"]
+
+# clone Azure ML GitHub sample notebooks
+RUN cd /home && git clone -b "azureml-sdk-1.0.8" --single-branch https://github.com/Azure/MachineLearningNotebooks.git
+
+# generate jupyter configuration file
+RUN ["/bin/bash", "-c", "source activate azureml && mkdir ~/.jupyter && cd ~/.jupyter && jupyter notebook --generate-config"]
+
+# set an emtpy token for Jupyter to remove authentication. 
+# this is NOT recommended for production environment
+RUN echo "c.NotebookApp.token = ''" >> ~/.jupyter/jupyter_notebook_config.py
+
+# open up port 8887 on the container
+EXPOSE 8887
+
+# start Jupyter notebook server on port 8887 when the container starts
+CMD /bin/bash -c "cd /home/MachineLearningNotebooks && source activate azureml && jupyter notebook --port 8887 --no-browser --ip 0.0.0.0 --allow-root"

how-to-use-azureml/training-with-deep-learning/README.md

@@ -4,12 +4,13 @@ These examples show you:
 
 1. [How to use the Estimator pattern in Azure ML](how-to-use-estimator)
 2. [Train using TensorFlow Estimator and tune hyperparameters using Hyperdrive](train-hyperparameter-tune-deploy-with-tensorflow)
-3. [Train using Pytorch Estimator and tune hyperparameters using Hyperdrive](train-hyperparameter-tune-deploy-with-pytorch)
-4. [Distributed training using TensorFlow and Parameter Server](distributed-tensorflow-with-parameter-server)
-5. [Distributed training using TensorFlow and Horovod](distributed-tensorflow-with-horovod)
-6. [Distributed training using Pytorch and Horovod](distributed-pytorch-with-horovod)
-7. [Distributed training using CNTK and custom Docker image](distributed-cntk-with-custom-docker)
-8. [Export run history records to Tensorboard](export-run-history-to-tensorboard)
-9. [Use TensorBoard to monitor training execution](tensorboard)
+3. [Train using Keras and tune hyperparameters using Hyperdrive](train-hyperparameter-tune-deploy-with-keras)
+4. [Train using Pytorch Estimator and tune hyperparameters using Hyperdrive](train-hyperparameter-tune-deploy-with-pytorch)
+5. [Distributed training using TensorFlow and Parameter Server](distributed-tensorflow-with-parameter-server)
+6. [Distributed training using TensorFlow and Horovod](distributed-tensorflow-with-horovod)
+7. [Distributed training using Pytorch and Horovod](distributed-pytorch-with-horovod)
+8. [Distributed training using CNTK and custom Docker image](distributed-cntk-with-custom-docker)
+9. [Export run history records to Tensorboard](export-run-history-to-tensorboard)
+10. [Use TensorBoard to monitor training execution](tensorboard)
 
 Learn more about how to use `Estimator` class to  [train deep neural networks with Azure Machine Learning](https://docs.microsoft.com/azure/machine-learning/service/how-to-train-ml-models).

how-to-use-azureml/training-with-deep-learning/train-hyperparameter-tune-deploy-with-keras/keras_mnist.py

@@ -0,0 +1,121 @@
+# Copyright (c) Microsoft Corporation. All rights reserved.
+# Licensed under the MIT License.
+
+import numpy as np
+import argparse
+import os
+
+import matplotlib.pyplot as plt
+
+import keras
+from keras.models import Sequential, model_from_json
+from keras.layers import Dense
+from keras.optimizers import RMSprop
+from keras.callbacks import Callback
+
+import tensorflow as tf
+
+from azureml.core import Run
+from utils import load_data, one_hot_encode
+
+print("Keras version:", keras.__version__)
+print("Tensorflow version:", tf.__version__)
+
+parser = argparse.ArgumentParser()
+parser.add_argument('--data-folder', type=str, dest='data_folder', help='data folder mounting point')
+parser.add_argument('--batch-size', type=int, dest='batch_size', default=50, help='mini batch size for training')
+parser.add_argument('--first-layer-neurons', type=int, dest='n_hidden_1', default=100,
+                    help='# of neurons in the first layer')
+parser.add_argument('--second-layer-neurons', type=int, dest='n_hidden_2', default=100,
+                    help='# of neurons in the second layer')
+args = parser.parse_args()
+
+data_folder = args.data_folder
+
+print('training dataset is stored here:', data_folder)
+
+X_train = load_data(os.path.join(data_folder, 'train-images.gz'), False) / 255.0
+X_test = load_data(os.path.join(data_folder, 'test-images.gz'), False) / 255.0
+
+y_train = load_data(os.path.join(data_folder, 'train-labels.gz'), True).reshape(-1)
+y_test = load_data(os.path.join(data_folder, 'test-labels.gz'), True).reshape(-1)
+
+training_set_size = X_train.shape[0]
+
+n_inputs = 28 * 28
+n_h1 = args.n_hidden_1
+n_h2 = args.n_hidden_2
+n_outputs = 10
+
+n_epochs = 20
+batch_size = args.batch_size
+
+y_train = one_hot_encode(y_train, n_outputs)
+y_test = one_hot_encode(y_test, n_outputs)
+print(X_train.shape, y_train.shape, X_test.shape, y_test.shape, sep='\n')
+
+# Build a simple MLP model
+model = Sequential()
+# input layer
+model.add(Dense(n_h1, activation='relu', input_shape=(n_inputs,)))
+# hidden layer
+model.add(Dense(n_h2, activation='relu'))
+# output layer
+model.add(Dense(n_outputs, activation='softmax'))
+
+model.summary()
+
+model.compile(loss='categorical_crossentropy',
+              optimizer=RMSprop(),
+              metrics=['accuracy'])
+
+# start an Azure ML run
+run = Run.get_context()
+
+
+class LogRunMetrics(Callback):
+    # callback at the end of every epoch
+    def on_epoch_end(self, epoch, log):
+        # log a value repeated which creates a list
+        run.log('Loss', log['loss'])
+        run.log('Accuracy', log['acc'])
+
+
+history = model.fit(X_train, y_train,
+                    batch_size=batch_size,
+                    epochs=n_epochs,
+                    verbose=2,
+                    validation_data=(X_test, y_test),
+                    callbacks=[LogRunMetrics()])
+
+score = model.evaluate(X_test, y_test, verbose=0)
+
+# log a single value
+run.log("Final test loss", score[0])
+print('Test loss:', score[0])
+
+run.log('Final test accuracy', score[1])
+print('Test accuracy:', score[1])
+
+plt.figure(figsize=(6, 3))
+plt.title('MNIST with Keras MLP ({} epochs)'.format(n_epochs), fontsize=14)
+plt.plot(history.history['acc'], 'b-', label='Accuracy', lw=4, alpha=0.5)
+plt.plot(history.history['loss'], 'r--', label='Loss', lw=4, alpha=0.5)
+plt.legend(fontsize=12)
+plt.grid(True)
+
+# log an image
+run.log_image('Accuracy vs Loss', plot=plt)
+
+# create a ./outputs/model folder in the compute target
+# files saved in the "./outputs" folder are automatically uploaded into run history
+os.makedirs('./outputs/model', exist_ok=True)
+
+# serialize NN architecture to JSON
+model_json = model.to_json()
+# save model JSON
+with open('./outputs/model/model.json', 'w') as f:
+    f.write(model_json)
+# save model weights
+model.save_weights('./outputs/model/model.h5')
+print("model saved in ./outputs/model folder")

how-to-use-azureml/training-with-deep-learning/train-hyperparameter-tune-deploy-with-keras/utils.py

@@ -0,0 +1,27 @@
+# Copyright (c) Microsoft Corporation. All rights reserved.
+# Licensed under the MIT License.
+
+import gzip
+import numpy as np
+import struct
+
+
+# load compressed MNIST gz files and return numpy arrays
+def load_data(filename, label=False):
+    with gzip.open(filename) as gz:
+        struct.unpack('I', gz.read(4))
+        n_items = struct.unpack('>I', gz.read(4))
+        if not label:
+            n_rows = struct.unpack('>I', gz.read(4))[0]
+            n_cols = struct.unpack('>I', gz.read(4))[0]
+            res = np.frombuffer(gz.read(n_items[0] * n_rows * n_cols), dtype=np.uint8)
+            res = res.reshape(n_items[0], n_rows * n_cols)
+        else:
+            res = np.frombuffer(gz.read(n_items[0]), dtype=np.uint8)
+            res = res.reshape(n_items[0], 1)
+    return res
+
+
+# one-hot encode a 1-D array
+def one_hot_encode(array, num_of_classes):
+    return np.eye(num_of_classes)[array.reshape(-1)]