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docs/data/reusables/security-overview/settings-limitations.md

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{% ifversion secret-scanning-non-provider-patterns %}
{% note %}
**Notes:**
- Enabling {% data variables.product.prodname_code_scanning %} will override any existing {% data variables.product.prodname_code_scanning %} configurations for the selected repositories, including any previous query suite selections and workflows for advanced setups.
- Enabling "Alerts" for {% data variables.product.prodname_secret_scanning %} enables high-confidence alerts . If you want to enable non-provider alerts, you need to edit the repository, organization, or enterprise settings. For more information about alert types, see "[Supported secrets](/code-security/secret-scanning/secret-scanning-patterns#supported-secrets)."
{% endnote %}
{% elsif bulk-code-scanning-query-suite and not fpt %}
{% note %}
**Note:** For {% ifversion code-security-multi-repo-enablement %}both the single and multiple {% else %}the single {% endif %}repository enablement settings, enabling {% data variables.product.prodname_code_scanning %} will override any existing {% data variables.product.prodname_code_scanning %} configurations for the selected repositories, including any previous query suite selections and workflows for advanced setups.
{% endnote %}
{% endif %}